Monday, November 5, 2012

i2b2 informatics for integrating Biology & the bedside


source : https://www.i2b2.org/software/index.html
i2b2: Informatics for Integrating Biology & the Bedside - A National Center for Biomedical Computing
Software i2b2 Software
Current Version
1.6.07
Release Notes
Use the links below to access the software repository where you will find the project source code, executable files, XSD files, PDF files and more.
Launch the AJAX web client in your web browser
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  • High Performance Computing
  • i2b2 Workbench Plug-in
  • The High Performance Computing plug-in allows users to take advantage of resources available on a remote location, generally a compute cluster.
  • Installation Guide
  • Messaging Guide
  • Design Document
  • Plug-in is downloaded through workbench
  • Text Analyzer
  • i2b2 Workbench Plug-in
  • The Text Analyzer plug-in allows for the decrypting and view of the notes data in the CRC.
  • Help Guide
  • Plug-in is downloaded through workbench
  • Export Tool
  • i2b2 Workbench Plug-in
  • The export data view will enable users to export data from the dimension and mapping tables
  • Help Guide
  • Plug-in is downloaded through workbench
  • Identity Management
  • Core Server Side i2b2 Cell
  • This cell is used to manage a patient's protected health information in a manner consistent with the HIPAA privacy rule. Patient data is available only as a HIPAA defined "Limited Data Set" to most of the hive.
  • Go to Download
  • Correlation Analysis
  • i2b2 Workbench Plug-in
  • This specialized analysis cell uses mutual information theory to calculate observed correlations within the data of the hive. This type of cell represents an important achievement of the hive.
  • Installation Guide
  • Messaging Guide
  • Design Document
  • Plug-in is downloaded through workbench
  • Import Tool
  • i2b2 Workbench Plug-in
  • The import data view will enable users to import data into the dimension and mapping tables
  • Help Guide
  • Plug-in is downloaded through workbench
  • Table View Plug-in
  • i2b2 Workbench Plug-in
  • The i2b2 plug-in for viewing data in various tables and other graphical forrmats.
  • Help Guide
  • Plug-in is downloaded through workbench
  • Patient Counts Plug-in
  • Optional Server Side CRC Plug-in
  • This server-side CRC plug-in calculates patient count breakdown for the children of a given concept. It is used in conjunction with an enhanced ontology workbench plug-in.
  • Functional Specification
  • Go to Download
  • i2b2 Web Client
  • The i2b2 Web Client is a collection of client-side components designed as an YUI AJAX-based plug-ins that communicate with i2b2 Cells and allow the investigator to query and display the data of the hive.
  • Install Guide
  • Project Request Guide
  • Go to Download
  • Annotator Tool
  • i2b2 Workbench Plug-in
  • The annotator view will allow non-expert NLP users viewing tools for NLP output
  • Help Guide
  • Plug-in is downloaded through workbench

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